Sentence examples for using the prediction programs from inspiring English sources

In silico analyses of these regions were performed using the prediction programs MEME (http://meme.nbcr.net) and MotifClick (http://motifclick.uncc.edu/) to determine overrepresented 8 bp motifs [ 41, 42].

In silico analysis using the prediction programs Mutation Taster (http://www.mutationtaster.org) and PolyPhen-2 (http://genetics.bwh.harvard.edu/pph2/) classified variant I as a benign polymorphism (rs1131188481).

A total of 5 kb upstream of these miRNAs was extracted, and HREs were predicted using the prediction program PROMO (details in the Methods).

HGT candidates were confirmed to be KNOTTIN proteins using the prediction program provided by the KNOTTIN database [ 31, 69].

Splice-site variants were analysed using the prediction program AUGUSTUS (http://bioinf.uni-greifswald.de/augustus/submission).de/augustus/submission

The region that comprised amino acid residues 112 121 was built as an α-helix of 3 turns based on secondary structure predictions using the prediction program Jpred [ 33].

In order to determine potential heme-binding residues in GIG47 we have used the prediction program, HemeBind [ 27], and found that Phe57, Tyr58, Arg60, Tyr64, Ala66, and Leu67 in GIG47 may interact with heme.

For miRNAs with few or no validated target mRNAs, the putative target mRNAs were integrated using the prediction software programs Pictar, TargetScan, and miRanda programs [ 38].

Similar to human BBS7, the TbARL6 protein does not contain a nuclear localisation signal (NLS) but does have a leucine-rich nuclear export signal (NES) motif (residues 139 147), using the prediction software programs NLStradamus and NetNES 1.1 [38,39].

Further analysis was carried out using the TFBS prediction programs Proscan version1.7 [ 18] and Transplorer (Biobase Biological Databases, Wolfenbüttel, Germany).

Physicians may use the prediction rule programmed in a PC or PDA to calculate the risk of sick leave for workers with shoulder pain.