Sentence examples for using the phase program from inspiring English sources

Regarding the merger of nonfunctional SNPs with indels, only 3 genes (OR1B1, OR4C5, OR7G3) showed such an ambiguity, and it was resolved by re-phasing using the PHASE program [ 101].

Haplotype estimation was calculated using the PHASE program, which reconstructs haplotypes from population genotyping data [ 25].

The haplotypes and their frequencies were estimated based on a Bayesian algorithm using the Phase program [ 21].

The haplotype estimation was carried out using the PHASE program (version 2.1; http://stephenslab.uchicago.edu/software.html phase), which implements a Bayesian statistical method for reconstructing haplotypes.

Double infections (n = 5) analyzed using the phase program yielded four perfectly resolved individuals (meaning no phase uncertainties and phase probabilities = 1.0).

The VDR haplotypes were statistically reconstructed from population genotype data using the PHASE program with the Markov chain method for haplotype assignments [ 32].

The putative haplotype information for ITS and RPB2 was inferred using the PHASE 2.1 program [27].

Haplotypes were constructed using the Phase 2.0 program (Stephens and Donnelly 2003).

Haplotypes were constructed using the PHASE software program (PHASE 2.1, Department of Statistics, University of Washington, Seattle, WA) [ 61, 62].

Haplotypes were constructed from the combination of the three VDR polymorphisms (BsmI, ApaI and TaqI), and their frequencies were inferred using the PHASE 2.1.1 program.

All genotype data of each sample were taken to infer the haplotypes by using the PHASE 2.0 program [ 23], a software for the reconstruction of haplotypes from the observed genotype data by using a Bayesian statistical approach.