Sentence examples for using the peptide pattern from inspiring English sources

Using the peptide pattern recognition (PPR) program [ 35], the two GH5s could be assigned to EC 3.2.1.4 (endocellulases), but only one of these was predicted to contain a CBM1.

We found that using the Peptide-to-MS2 modelling algorithm supplemented with the parallel complementary tests for decoy sequences does produce good results for surveying a specified peptide sequence pattern in CID MS2 spectra.

As shown by atomic force microscopy (AFM), line widths and line distances of the peptide pattern differ less than 0.5 μm from the used PDMS stamp.

The similarities in the peptide pattern in the area of the four- and five-chain peptides are larger than for two to three-chain short-chained peptides.

Therefore, we excluded this peptide from the peptide pattern.

Then, we compared the peptide patterns between each among the three groups using the SVM strategy (Table 2).

During optimization of the peptide analyses we first used protein digests from five subjects and found that the main challenge of the study was in the extremely high variability of the peptide patterns between the subjects.

To obtain a systematic analysis of the divergent families of lytic polysaccharide monooxygenases we used Peptide Pattern Recognition to divide 5396 protein sequences resembling enzymes from families AA9 (1828 proteins), AA10 (2799 proteins) and AA11 (769 proteins) into subfamilies.

The antimicrobial peptides were predicted by BLAST+ using the antimicrobial peptide database (APD3).

When the full-scan mass spectrum was searched using the pattern matching software, we identified several halogen-labeled BSA peptides, collectively reflecting 32% coverage of single cysteine-containing peptides (Supplementary Table 3).

Use the swirls pattern on white.