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P-values for over-representation of all motifs in all clusters were finally calculated using the optimized thresholds.
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Tests were made using the (optimized) log of SPL and a non-optimized log.
A verification experiment using the optimized medium was carried out.
Reapply Steps 2 and 3 using the optimized projection matrix.
Using the optimized annotations, Kendall's W was 0.384.
Therefore, we use the optimized scheduling thresholds, ρ∗ and ρ′∗, and analyze Clog and Csum as the functions β, α, and τ.
The Fisher test p-values with the optimized thresholds are hereafter termed p-scores.
Since the proposed method determines the optimized threshold using the characteristics of the received signal, instead of the transmitted signal, it can be used in practical scenarios.
We ran MatInspector twice with different parameters; once using the default score threshold (called the "optimized" threshold, referred to in the manuscript as "opt"), and again using a threshold 0.1 units lower than the optimized threshold ("opt-0.1"), which results in about ten times as many matches as does "opt".
We developed the M-score diagnostic system using the analysis method of gene expression profiling and calculated the optimized threshold by LOOCV.
where γ 0 = s max P N γ ¯ + 1 λ ln 2 S ¯ − C 2 / ln ε / C 1 is the optimized threshold for γ k below which the channel is not used.
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