Sentence examples for using the nj method from inspiring English sources

For concatenated housekeeping alleles, evolutionary history was inferred using the NJ method or maximum parsimony method (PAUP 4.0).

The phylogeny was reconstructed using the NJ method, which was further used to detect positive selection using the branch-site and extended clade models.

Phylogenetic trees created using the NJ method and the ML method resulted in trees with identical topologies and clusters with significant bootstrap support.

The HA-based phylogenetic tree was constructed using the NJ method and the tree topology was further confirmed by using the Bayesian approach as implemented in Mr Bayes 3.2 [29].

The topology was generated using the NJ method.

The dendrogram was constructed using the NJ method with the program TreeView [ 34].

We used the NJ method as it can easily accommodate short internal branches and is recommended for constructing phylogenetic trees of closely related species [ 41].

Phylogenetic trees with a topology consistent with expansion in vertebrate evolution before the origin of gnathostomes using the NJ-method were examined using the Quartet-puzzling method in the Windows version of Treepuzzle 5.2 [ 118] to further support the result.

The phylogenetic tree was constructed by the neighbor-joining (NJ) method using the NJ algorithm implemented in Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0 [ 31].

Trees were generated using the NJ and ME methods.

Phylogenetic trees (Additional file 5) were constructed using the NJ and ML methods [ 77].