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When a frame is decoded at the encoder/decoder, the McFIS is updated using the newly decoded frame.
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The newly decoded genomic sequence of S. suis 05ZYH33 makes it possible to systematically investigate the genetic basis of streptococcal pathogenicity.
This illustrative exercise can be done using u.decodeBin [ 28] as described in the Decoding section or, more conveniently, using the single coordinate decoding in the accompanying web tool.
And then, the total bits are decoded by using the Viterbi soft decoding algorithm.
Using the later decoding, we can decode the message of each node at the opposite node.
We use the rank decoding scheme with the prediction factor k set to 0.0015 by default.
For GRHCRF and HMM-B2TMR we used the posterior-Viterbi decoding.
For PRED-TMBB, the predictions were performed using the Viterbi and Posterior Decoding algorithms.
Otherwise, node D decodes the combined signal by using the LLR for each bit before decoding. .
The latter could be decoded using the initial code.
HMMs were trained and decoded using the implementation written by A. Krogh (unpublished).
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