Sentence examples for using the newbler software from inspiring English sources

The combined reads of the ovary and back-leg muscle were also assembled using the Newbler software.

De novo assembly of the filtered sequence data was carried out using the Newbler software.

First, sequences were mapped on the reference genome sequence Bordetella pertussis Tohama I, NC_002929, by using the Newbler software V 1.1.02.15.

We assembled data generated by 454 using the Newbler software package with all settings set to default and the '-finish' mode invoked.

Trimming of low-quality sequence and 454 adaptors were performed using the Newbler software (Roche/454).

The masked sequences were then de novo assembled using the Newbler software (454 Life Sciences).

We used the Newbler software, GS de novo Assembler (Roche, version 2.5.3) with default parameters, to assemble reads into contigs, then further into isotigs.

After sequencing on the Roche GS20 genome sequencer the raw reads were assembled using the Newbler assembler software package v1.0.53.17.

We generated 20,927 contigs for American chestnut healthy stem and 50,612 contigs for Chinese chestnut healthy stem using the Newbler assembly software package (454 Life Sciences) with an average length of 273 nt and 330 nt, respectively.

The filtered reads were assembled using the Newbler assembly software, developed by 454 Life Sciences (version 2.6, Roche).

The sequence assembly and scaffolding was done using the Newbler assembler software v2.9.