Sentence examples for using the newbler assembly from inspiring English sources

The filtered reads were assembled using the Newbler assembly software, developed by 454 Life Sciences (version 2.6, Roche).

The trimmed and size-selected reads were assembled using the Newbler assembly program (Roche).

Genomes were assembled using the Newbler assembly program (v2.0.01.14 or later) and complete genome assembly statistics are present in Table 1.

Using the Newbler assembly program (Roche, Switzerland), the reads were assembled into three tissue-specific transcriptome assemblies, as well as one pooled assembly, which contained between 15,605 and 34,005 isogroups (genes) (table 1; and supplementary section S1, Supplementary Material online, for full details of the assemblies).

The subsequent assembly of the generated reads was performed using the Newbler assembly software, version 2.0.00.22 (454 Life Sciences).

Contig construction of the 454 reads using the Newbler assembly software (454 Life Sciences) led to the construction of 7,171 and 14,308 contigs from American and Chinese chestnut, respectively (Table 1).

De novo draft genome assemblies were obtained using the Newbler assembler, software releases 1.1.01.20 (CGSSand) and 1.1.03.24 (CGSSand and CGSSa03).

The sequence assembly and scaffolding was done using the Newbler assembler software v2.9.

The obtained nucleotide sequence reads were assembled using the Newbler de novo sequence assembly software.

Assembly of the obtained nucleotide sequence reads was performed using the Newbler, de novo sequence assembly software [ 11].

Assembly of the nucleotide sequence reads was performed to obtain non-redundant contigs and singlets using the Newbler, a de novo sequence assembly software.