Sentence examples for using the ml approach from inspiring English sources

We acknowledge that violation of the normality assumption calls into question the validity of using the ML approach; however, it is known that use of this method will not change the factor structure or loadings and will only affect the standard errors.

DNA phylogenies were inferred using the ML approach implemented in RAxML with 100 randomized MP starting trees.

Consequently, the silent site substitution rates in table 1 and figure 1 B were calculated using the ML approach, implemented through the program PAML v4 (Yang 2007).

We estimated ω using Markov codon models using the ML approach as implemented in the CODEML program from PAML v4 (Yang 2007) software package.

Phylogenetic trees of all investigated enzymes were constructed using the ML approach (RAxML [ Stamatakis, 2014]), Bayesian inference (PHYLOBAYES [ Lartillot and Philippe, 2004]), and a method designed to deal with amino acid saturation (AsaturA [ Van de Peer et al., 2002]).

Selective pressures acting on coding regions after gene duplication and the estimates of synonymous and nonsynonymous rates, including total tree length for synonymous substitutions, were estimated using the ML approach implemented in PAML version 4 [ 56].

The degree of conservation of each amino acid in the ferritin family was analyzed by estimating site-specific evolutionary rates using the ML (maximum likelihood) approach of the ConSurf server [72].

For normalizing the variations in the glottal parameters of the children test set "CH1" with respect to those of the adults training set "TR1" used for training the acoustic models using the ML-based approach, the OQ, RQ, and SQ of the signals are modified by factors ranging from 0.55 to 1, 0.35 to 1, and 0.45 to 1, each with a step size of 0.05, respectively.

QuartOPs were analyzed using the ML-mapping approach according to Strimmer and von Haeseler, Bayesian probabilities mapping and bootstrap support values mapping techniques (see details below).

We will thus seek an alternative approach using the ML technique to be described next.

One approach could be using the ML estimation [39, 40].