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Microarray image gene spot signal strength was measured using the microarray analyzing software ArrayGauge version 2 (Fujifilm Corp .. Every gene was spotted at two locations on the microarray slides to confirm reproducibility.
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Using the microarray data, we analyzed the intrinsic differences between each adipose depot at 28°C.
Using the microarray based approach, we analyzed the cellular gene expression profile of lung adenocarcinoma A549 cells upon treatment with non-thermal plasma, and focused on finding plasma-associated molecular signatures to elucidate the impact of NTP on the transcriptome of this tumor cell.
The expected number of OXPHOS genes is calculated based on the total number of probe IDs annotated to OXPHOS genes analyzed using the microarray (n=147), the total number of probe IDs analyzed using the microarray (n=28869), and the total number of probe IDs that show reduced gene expression in the T2D human islets with P<0.05 (n=1416).
We confirmed 354 candidate miRNAs, and their expression profiles were analyzed using the microarray.
Microarray data were analyzed using the Microarray Suite software (MAS) version 5.0 (Affymetrix).
The probe array was scanned and the data analyzed using the Microarray Suite Software (Affymetrix).
The scanned images were analyzed using the Microarray Analysis Suite 5.0 (MAS5, Affymetrix).
B-10 treatment induces significant changes in expression of 24 out of 207 stress genes analyzed using the microarray technique.
To identify diurnal rhythms of transcripts, all 36 summer samples and 8 selected winter samples (4 00/8:00/12 00/16:00/20:00/24:00 on Dec 22, and 12 00/24 00 on Dec 23) were analyzed using the microarray.
To examine whether the other rice WRKY family members are directly monitored by WRKY proteins, the expression profiling of WRKY family members in OsWRKY13-activated lines was analyzed using the microarray data (GEO database accession number GSE8380).
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