Sentence examples for using the liftover tool from inspiring English sources

Genomic locations of miRNA hairpins were extracted from miRBase and converted to the hg18 assembly using the liftover tool.

The genomic coordinates were converted to the mouse genome (version mm8) using the LiftOver tool at the UCSC genome browser.

First, the CAGE-tag mappings were remapped to the most recent genome assembly using the liftOver tool from UCSC [6].

To compare the aCGH data to WCEseq estimate, we first converted the aCGH data into hg18 assembly using the liftOver tool of UCSC Genome Browser.

For analysis of data from HeLa and HepG2 cells, EvoFold UTR and CDS hairpin coordinates were converted to this version using the Liftover tool at the UCSC genome browser [32].

Datasets that were mapped to hg19 were converted to hg18 using the liftOver tool.

We used the liftOver tool to convert the NCBI Build36 coordinates to GRCh37 for the 1000 Genomes Project Pilot Project results [ 1].

To facilitate NS queries based on hg19, we used the liftOver tool from the UCSC Genome Browser [Rhead et al., 2010] to convert the coordinates of NSs to hg19.

If the ChIP-seq data are based on hg18, we use the liftOver tool downloaded from the UCSC genome browser [ 36] to convert the hg18 coordinates to hg19's.

These data were converted by us to GRCh37 using the liftOver genome tool by UCSC.

The genome coordinates of each feature were updated using the LiftOver software tool available from UCSC Genome Bioinformatics (Hinrichs et al. 2006).