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Matrix manipulations are accomplished using the Java package JAMA [ 24] and distributional calculations are made using the Java package DistLib [ 25].
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The PathCase-SB Graph Viewer uses the Java software platform.
JNI-InChI is the packaging of the InChI libraries in portable Java libraries using the Java Native Interface (JNI), available on Sourceforge under GNU Lesser General Public License 3.0 (LGPL) [7].
Users may re-enable automatic execution of Java applets using the Java Preferences application.
In addition, Apple explained in its support document for the Java update, "Users may re-enable automatic execution of Java applets using the Java Preferences application.
GOssTo was developed using the Java programming language.
ProSOM was implemented using the Java language version 1.5.
Using the Java programming language ensures cross-platform compatibility [ 32].
The image stack is analyzed using the JAVA-based ImageJ, a freely available software package, using plugins developed at NCMIR for processing, aligning, and assembling these massive datasets.
LAMINA uses the Java Advanced Imaging (JAI) package to support common image file formats, which is bundled with the installation and hence no additional installation should be required.
The concern persistence is implemented by the Java package named "java.sql" with several elements which corresponds to Java classes.
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