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Genotyping errors were detected and corrected using the iterative error detection function, running 15 iterations (start = 0.0001; step = 0.0001).
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CEL files were processed with the Affymetrix Expression Console software to generate probe level summarization files (CHP) using the iterative Probe Logarithmic Intensity Error Estimation (IterPLIER) and sketch-quantile normalization algorithms.
Using the iterative projection method, and in order to limit error propagation, the projection process started with the map that presents the more stable framework and well ordered and spread loci i. e. the map derived from the DYDH population.
The effect of variation in C i on R d was corrected using the iterative method of Kirschbaum and Farquhar47.
Using the iterative formula, the remaining terms can be obtained.
Especially, the iterative error with GS and GS-PhSparse is shown in Figure6a, and the iterative error with RAAR and RAAR-PhSparse is shown in Figure6b.
Instead, we use the iterative Successive Over-Relaxation method to solve the linear systems up to a relative error of 10−9 for each variable.
Then to reduce the computational overhead of the optimization approach, we develop a simplified non-iterative algorithm using the error covariance matrix decomposition technique based on the high SNR assumption.
With an increase in iterations, the mean square error of channel estimation reduces and achieves the lower bound at approximately 20 dB. Figure 9 Mean square error of channel estimation using the proposed iterative decision-directed scheme.
This is accomplished using the following iterative function.
The final 3D maps were refined using the standard iterative projection matching, class-averaging and Fourier reconstruction procedure of EMAN2.
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