Sentence examples for using the invariant set from inspiring English sources

The samples were normalized using the invariant set method (dChip 2.0 software) [ 21].

Second, each group of microarray profiles was normalized by using the invariant set method [ 9].

However, the variation of each experiment is accounted for because the thresholds are calculated using the invariant set from each experiment.

Differences in Cyclin A1 expression between molecular tumor subtypes (1, 2, 4, and 5), according to the molecular classification of EOC by Tothill et al. Data sets were retrieved from the NCBI GEO database and normalized using the invariant set method (dChip 2.0 software) [ 23 ].

The data was then loaded into the Gene Traffic Microarray Analysis program where it was normalized using the invariant set command, using the Clark 100 uM Fe as the control group, and a model based expression index (MBEI) [ 44] analysis was performed on perfect match probes only.

Data were normalized using the Invariant Set Method described earlier [15] and modeled using the PM/MM model.

The aim of iteration process of IMM method is to look for an invariant set of non-DE genes and use the invariant set to normalize the samples.

The data set was normalized by the dChip software which uses the invariant set normalization and a hidden Markov model [ 15].

We processed the microarray data using the invariant-set normalization [ 38] followed by median polish summarization [ 39], and obtained expression for each probe set.

Briefly, data have been normalized using the invariant probe set normalization method[ 48], implemented in d-chip software, and matched for the common probe set between the different platforms used in the experiments.

The "Invariant Set" approach is used for normalization at the probe level, and the "Model based" method is used to summarize and obtain expression for each probe set [ 52].