Sentence examples for using the great package from inspiring English sources

Gene ontology analyses were performed using the GREAT package [ 30].

Gene Ontology (GO) analyses for biological processes were performed using the GREAT package [ 115].

UCSC Table Browser was used to obtain genomic sequences, and were considered to contain an κBRE if their genomic sequences contained at least one site matching the NF-κB (Hsapiens-JASPAR_2014-NFKB1-MA0105.3) JASPAR motif with a score of 90% or greater, as determined using the Biostrings package in Bioconductor59.

The statistical analysis were performed using the R statistical package and the effsize package (Torchiano 2017).

Models were fitted using the lme471 package.

Solubility and supersaturation were calculated using the software package EQ3/6.

The data was plotted using the rworldmap package in R63.

Data were analyzed using the R package.

Analysis was done using the same package.

and R using the lumi package [ 27].

We detected recombination using the RDP3 package.