The experiments were carried out using the GO annotations as the information source for the algorithm.
PPI information was input using the GO term 'protein binding' (GO: 0005515) or a child term, when appropriate; the interacting partner was entered in the 'Interaction with' field.
Therefore, for each network, we only use the GO terms whose information content (IC) is higher than 2. The information content of a GO term g is defined as IC g)= −log(| g| /|root|), where root is the corresponding GO category (biological process, molecular function or cellular component) of g.
In particular, all of the databases used the GO (18) to encode information about genes.
Even if you don't have a fancy smartphone, your mobile device should have contacts, calendar and notes applications (not to mention a camera) that you can use to record important, on-the-go information.
A custom pipeline converted GO terms to GO Slim terms, using the Protein Information resource and Generic GO Slim files [ 43].
In its lawsuit, Hawaiian said Mesa employees pretended they were potential investors to obtain confidential information on Hawaiian's routes, passengers, marketing and financial projections from bankruptcy court, then violated a nondisclosure agreement with Hawaiian by using the information for Go's start-up.
By using the topological information of GO directed acyclic graph (DAG), a recently designed method Relative Specificity Similarity (RSS) models both the distance of given term pair to its closest leaf terms and the distance to their most recent common ancestor (MRCA) [ 22].
Using the register information, we went to communities where these mothers came from.
For the GO analysis, we matched probe sets to GO identifier using the information available in "biomart" (www.ensemble.org) version 36 for human genes (GRCh37).
