Sentence examples for using the global alignment from inspiring English sources

Hox clusters of human, tammar wallaby, chicken, anole lizard, Western clawed frog, Banna caecilian, Indonesian coelacanth, spotted gar and elephant shark were aligned using the global alignment program LAGAN [ 30] available on the VISTA website [ 31] and screened for the presence of CNEs.

Two strategies were implemented to align these orthologous sequences using the global alignment algorithm – mlagan: 1) optimizing the alignment parameters and 2) applying a post-alignment filter.

Rolexa reads were therefore aligned to the reference genomic sequence using the global alignment software align0 using the method described hereafter.

We propose to define this string's similarity using the global alignment kernel framework.

Seven new codR amplicons were designed using the global alignment and substitution rate histogram.

CodR primers previously utilized by our laboratory for mtGenome sequencing [ 16- 20] were evaluated using the global alignment, substitution rate histogram, and Primer3 software [ 21], as described above.

Multiple alignments were performed using Genious global alignment with free end gaps method.

Pair-wise cDNA and protein comparisons used the global alignment program ALIGN, available at EBI, to calculate a percent identity and similarity.

Once the clusters were screened for informativeness (with specific regard to gene tree parsimony), we used the global alignment program Clustal W [ 73] to align nucleotide sequences within the clusters.

Two protein sequences of each gene pair were aligned using the global sequence alignment program NEEDLE in the EMBOSS package [ 38].

Figure 16 (a) Range profiles and (b) ISAR image for the real data of the vessel after using the global range alignment algorithm.