Sentence examples for using the genome mapping from inspiring English sources

The mapped reads were locally realigned using the genome mapping tool RealignerTargetCreator from the Genome Atlas Tool Kit (GATK) [ 15].

PASA aligned the Trinity assembled contigs to the ME49 genome using the Genome Mapping and Alignment Program (GMAP) [ 53] (gmap-2007-09-28), filthose invalid contigs (those most likely arising from sequencing and Trinity assembly errors), and reconstructed more complete transcripts from the Trinity contigs by reporting only the single best alignment.

The gene flow events of the three selected models for SW, MW and SE Korea can be assessed using the genome map.

Using the genome map assembly as input, we performed structural variation detection, and the genome maps were compared to hg19.

We're going to use the genome map to slow down the aging process so the next generation has the opportunity to live to be 150.

Fasta sequence was mapped to the human hg19-genome sequence using the Genomic Mapping and Alignment Program (GMAP) and a minimal intron length of 25 (–minIntronlength = 25).

Pahang (DH Pahang) whole genome sequence (downloaded at http://banana-genome.cirad.fr) using the genomic mapping and alignment tool GMAP [ 86].

Conversions between bovine Ensembl IDs, Entrez gene IDs and gene symbols, when needed, were done using the genome wide annotation map for bovine available from the Bioconductor package 'org.Bt.eg.db' [ 50].

"We believe the future of agriculture will be to navigate using the rice genome map," said Dr. Steven P. Briggs, head of Syngenta's genomics unit.

By studying the genome maps using the UCSC genome browser, we could not find any evidence of it affecting a transcription factor binding site or a known regulatory element.

The genome maps were constructed using GCView57.