Sentence examples for using the gene sequence from inspiring English sources
By searching the Arabidopsis Information Resource TAIRR, http://www.arabidopsis.org/) database using the gene sequence of LOC_Os06g39750, ten Arabidopsis homologous genes were identified (Additional file 2: Table S12).
Likelihood estimates of the per site recombination rate were obtained for different regions of the genome, using the gene sequence data sets.
Based on the MFα region sequence from C. auris, a specific PCR-based method was developed for the direct detection of C. auris DNA by using a C. auris -specific primer (CaMF [5′- GAGAAAAGAGACGCTGAAGCTGAG-3′]) designed using the gene sequence which codes for the unique pheromone together with reverse primer (CaMR [5′- TCAACCTTCGAGGTCAGCTTCA-3′]).
Using the gene sequences that code for the visual protein rhodopsin in 30 living vertebrates, such as alligators, chickens, and more primitive vertebrates such as lampreys, the researchers reconstructed the rhodopsin belonging to the archosaurs.
Using the gene sequences and gene expression data sets generated above, we assessed the association between codon usage and gene expression within N. tetrasperma and within N. discreta.
Using the gene sequences for the 112 species from the Joint Genome Institutes Integrated Microbial Genomes database (JGI-IMG) [ 29] we then created the transcript pools.
Specific primers (Additional file 1: Table S1) were designed with Primer Express 1.0 software (Applied Biosystems) using the gene sequences obtained from Affymetrix Probeset IDs.
Alignments for positive selection and recombination analyses, which were performed as detailed above, were constructed using the gene sequences for the five genomes analyzed and the gene sequences for the additional isolates sequenced.
Additionally, excavate genome databases were searched using the gene sequences from L. major and T. cruzi without resulting in any hits other than in trypanosomes and leishmanias where in excess of 50 sequences were retrieved.
We used the gene sequence to construct temporal groups.
For the TRBV/TRBC gene assay design, we used the gene sequences published at the Immunogenetics Database [http://imgt.cines.fr/] according to ABI recommendations using the Primer Express Software (version 2.0; ABI).
