Sentence examples for using the genbank extraction from inspiring English sources

O. sativa promoters (−1000 bps) were extracted from GenBank RAP BUILD 3 files provided by NCBI [ 68] using the GenBank extraction script aGBSQL of the Motif Mapper for Python v1.4 software [ 37] and choosing option root = 2 (take most 5' annotation point for each gene [option TSS or ATG]).

In this study, eight coding sequences (CDS) of AP2 gene were selected from different plant species using the GenBank database.

Histones were extracted by using the acid extraction method63.

Data extraction was performed with the 'Feature Extraction Software V10.7.3.1' using the extraction protocol file 'GE1_107_Sep09.xml', except that 'Multiplicative detrending' algorithm was inactivated.

Data extraction was performed using the Agilent feature extraction software V9.1.3.1.

In addition to these fragments, one F. x ananassa EST (Genbank Acc. No. GW403182.1) resulted from a BLAST using the FaPIP1 1 (Genbank Acc. No. GQ390798.1) coding sequence as a query.

Functional predictions were based on BLASTp similarity searches using the UniProtKB, GenBank, and Swiss-Prot protein databases.

The genetics pioneer Craig Venter, and James Watson, the co-discoverer of the double helix structure of DNA, have both had their genomes sequenced and made available to scientists using the public GenBank database.

EcoR1-NcoI fragments were isolated by enzymatic digestion, purified by using the GenEluteä Gel Extraction Kit (Sigma) following the supplier's instructions, and fused to the uidA gene (GUS) in the pCambia1391Z binary plasmid (Genbank AF234312.1, Cambia, Canberra, Australia).

Automated extraction also was conducted using the MagNa Pure LC extraction system (Roche).

Sequence variants were designated according to Human Genome Variation Society recommendations (www.hgvs.org/rec.html) using the following reference sequences: GenBank, NG_007973 (gDNA); GenBank, NM_000781.2 (cDNA); and GenBank, NP_000772.2 (protein).