Sentence examples for using the genbank entry from inspiring English sources

SpPKC1 mRNA for rescue experiments was obtained as follows: an EST (National Center of Biotechnology Information (NCBI) accession number CD290393) containing the SpPKC1 start codon was obtained by BLAST using the Genbank entry of Lytechinus pictus PKC1 (Genbank: U02967; [ 36]) as a query sequence.

To initially identify the locations and DNA sequences of the NANOG gene and its pseudogenes in the chimpanzee genome, we used the GenBank entries for the human NANOG gene and its 11 pseudogenes as queries for MEGABLAST searches of the chimpanzee genome Build 1.1 assembly with default settings including filtering for repetitive sequences.

In the case of our downy mildew ITS dataset, using the GenBank host entries, if pre-processed in a manner similar to the taxonomy, resulted in exactly the same optimal parameters than the taxonomy-based optimization.

# uAUG not present in the GenBank entry but used in reporter constructs [ 26]. § Numbers in parentheses indicate the miRNA end predicted to interact.

Sequencing of the cloned novO gene revealed differences to the GenBank entry AAF67508.1 resulting in a different amino acid at position 223 (Cys instead of Ser).

The primer sequences were obtained on the basis of reported nucleotide sequences [31] and the Genbank entry NT_026437.

Murine TRGC1 correspond to position 1 50000 of the GenBank entry [GenBank: AF037352].

The 264-bp fragment was sequenced and compared with the GenBank entry for NDM-1.

The almost complete 16S rRNA gene sequences were searched against the GenBank entries using on-line BLAST (http://www.ncbi.nlm.nih.gov/blast).nih.gov/blast

with the aid of the script header_standardizer, which uses the data included in the GenBank entries [a.I and b.I].

For all other samples, profiles were identical to the calculated restriction profiles using only one consensus sequence of the Genbank entries.