Sentence examples for using the experimental peptide from inspiring English sources

In total, 60 AS events corresponding to 59 AS loci were confirmed using the experimental peptide set.

The in silico experiments should thus reveal whether the number of AS events identified using the experimental peptide sets significantly deviated from the expected number of AS events.

The absolute numbers of AS events that could be confirmed using the experimental peptide sets were by themselves not very indicative for the contribution of AS to the proteome diversity in A. thaliana.

Proteins were identified by comparing all of the experimental peptide MS/MS spectra to the Swiss-Prot database using Mascot database search software (version 2.3.2, Matrix Science, London, UK).

Each FindMod query used the UniProt accession number for the protein identified through peptide mass fingerprinting (from Gavin et al., 2006) [ 38], the experimental peptide masses for this protein and the tailor-made mass tolerance in Da.

The experimental peptide fragments were confronted to the NCBI non-redundant mouse database.

The in silico AS detection experiments involved randomly pooling non-redundant peptide samples, equal in size to the experimental peptide samples, from an initial peptide population.

No major inhibition was observed for any of the two ACPA pools, when using the unmodified peptide version Arg573 in the same experimental conditions as the citrullinated fibrinogen peptides (Fig.  2a and b, left panels).

The antimicrobial peptides were predicted by BLAST+ using the antimicrobial peptide database (APD3).

Using the same experimental setup and HuD 9-mer peptides, Rousseau et al.

It is estimated both by comparing the experimental data to known databases and by using the taxa-specific peptides (TSPs) methodology [ 8].