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Functional enrichment analysis of gene lists was performed using the DAVID webtool [ 53, 54].
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Genes with a variance > 20% were analysed using the DAVID functional annotation webtool [ 26] [ http://david.abcc.ncifcrf.gov].abcc.ncifcrf.gov]
We characterized the resulting gene sets by performing a Gene Ontology (GO) analysis based on C. elegans one-to-one orthologs using the David functional annotation webtool [ 30].
A gene ontology (GO) analysis was performed using the DAVID website.
Using the DAVID functional annotation clustering tool, the up- and down-regulated genes can be categorized into 176 and 146 overlapping functional gene clusters, respectively.
Differentially expressed genes were categorized in GeneOntology groups using the DAVID tool (http://david.abcc.ncifcrf.gov/).abcc.ncifcrf.gov/
Functional clustering was performed using the DAVID database.
We analyzed the 1,817 genes that were hypermethylated only in RL cells using the DAVID interface (http://david.abcc.ncifcrf.gov/).abcc.ncifcrf.gov/
Functional annotation and enrichment analyses were done using the DAVID platform version 6.7 (http://david.abcc.ncifcrf.gov/home.jsp) [36], [37].
UniGene gene identifiers were converted to DAVID identifiers using the DAVID Gene ID conversion tool.
KEGG pathway enrichment analysis was performed using the DAVID web server (http://david.abcc.ncifcrf.gov/home.jsp).jsp
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