Sentence examples for using the david package from inspiring English sources

A GO analysis was employed to predict gene function and calculate the functional distribution frequency, using the DAVID package (ABlife Inc., Wuhan, China).

Genes showing a reproducible threefold increase or decrease in expression relative to their expression in wild-type siblings in three independent experiments were clustered based on their functional Gene Ontology annotations and known biochemical pathways using the DAVID package (Huang et al., 2009).

The human orthologs were used to create input files for gene ontology functional analyses using the DAVID software package [ 28, 29].

Functional classification of differentially expressed proteins was performed using the DAVID software (http://david.abcc.ncifcrf.gov/).abcc.ncifcrf.gov/

We used the DAVID software on the groups of induced and repressed genes (http://david.abcc.ncifcrf.gov/home.jsp) [7] to detect Gene Ontology groups.

For each miRNA, we predicted its targets using TargetScan and then performed pathway enrichment analysis on the targets using the DAVID online software (http://david.abcc.ncifcrf.gov/).abcc.ncifcrf.gov/

Gene ontology analysis was performed using the DAVID (Huang et al., 2009) and Ingenuity Pathway Analysis software packages (Ingenuity Systems), and gene maps generated with STRING (www.string-db.org).

A gene ontology (GO) analysis was performed using the DAVID website.

Using the DAVID functional annotation clustering tool, the up- and down-regulated genes can be categorized into 176 and 146 overlapping functional gene clusters, respectively.

Differentially expressed genes were categorized in GeneOntology groups using the DAVID tool (http://david.abcc.ncifcrf.gov/).abcc.ncifcrf.gov/

Functional clustering was performed using the DAVID database.