Exact(6)
Enrichments in particular biological processes, pathways, and functions were calculated statistically using the DAVID annotation database.
The p-values obtained were calculated using the DAVID annotation system [ 33].
For cross-platform comparison, Affymetrix probe sets and Codelink identifiers were mapped to Unigene ids using the DAVID annotation tool (see above).
Functional annotation (i.e., Gene Ontology [GO] term) for all expanded families was obtained using the DAVID annotation tool (Huang et al. 2009a, 2009b).
For the results of additional analysis using the DAVID annotation system see Additional File 5 (genes related to cellular adhesion, cytoskeleton, or motility) and Additional File 6 (genes related to the nervous system).
To characterize the nature of Rbf1 direct targets, we performed GO analysis on genes associated with the greatest confidence peaks using the DAVID annotation analysis system (Huang da et al. 2009).
Similar(54)
To elucidate the biological significance we used the DAVID annotation clustering tool and found a parallel reversed functional trend.
To fully inverstgate the function of the differentially expressed miRNAs, we collected pig cDNA sequences were randomly selected from GenBank and performed a GO term and KEGG pathway annotation using the DAVID gene annotation tool (http://david.abcc.ncifcrf.gov/).abcc.ncifcrf.gov/
The Gene Ontology (GO) terms and KEGG pathways of targeted genes were annotated using the DAVID gene annotation tool (http://david.abcc.ncifcrf.gov/UTH).abcc.ncifcrf.gov/UTH
Of 465 Ensembl gene identifiers found using the DAVID Functional Annotation Tool, 318 had functional annotations.
To assess the biological relevance of the differentially expressed genes, we performed the Gene Ontology (GO) annotation and pathway analysis using the DAVID functional annotation software [17].
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