Sentence examples for using the david algorithm from inspiring English sources

GO analyses were performed using the DAVID algorithm (Huang et al. 2009), with the Benjamini correction for multiple tests.

Biological processes, molecular functions, cellular components, and relevant pathways were identified using the DAVID algorithm (v6.7, [ 45- 47]).

As the first step, we carried out gene set enrichment analysis for the groups of hypo- and hypermethylated genes using the DAVID algorithm and database.

We performed GO enrichment analysis to assess to what extent the candidate genes identified as top associations in the GWA analyses were enriched for biological processes, molecular functions, and cellular components, using the DAVID algorithm (Huang et al. 2009).

Gene ontology (GO) term enrichment was performed with the two sets that were ≥2-fold upregulated or downregulated with statistical significance, using the DAVID algorithm [ 33] with the total set of genes of the Affymetrix HG-U133A chip as background.

Using the DAVID algorithm (Huang et al. 2009), we found that a large proportion of the differentially expressed genes (123/181) are not associated with a GO molecular function term.

We assigned biological function to the tags within each DIANA cluster using the DAVID functional annotation clustering algorithm (Huang da et al., 2009).

A gene ontology (GO) analysis was performed using the DAVID website.

Using the DAVID functional annotation clustering tool, the up- and down-regulated genes can be categorized into 176 and 146 overlapping functional gene clusters, respectively.

Differentially expressed genes were categorized in GeneOntology groups using the DAVID tool (http://david.abcc.ncifcrf.gov/).abcc.ncifcrf.gov/

Functional clustering was performed using the DAVID database.