Sentence examples for using the complete genome from inspiring English sources

For instance, using the complete genome sequences, investigators are now identifying short sequences that are missing from one or more genomes [1] [3].

Using the complete genome sequence of E. coli DH1 ME8569 as a reference, we evaluated the accuracy of sequence reads obtained from three NGS platforms by aligning these reads to the reference genome sequence.

The extent to which genetic transformation by exogenous DNA has occurred over evolutionary time was initially addressed by an in silico approach using the complete genome sequence of the Ralstonia solanacearum GMI1000 strain.

AppChip2 was designed using the complete genome sequence from the serotype 5b reference strain L20.

Bordetella pertussis: 100 tiles of 76-cycle single-end reads from the coccobacillus B. pertussis, using the complete genome of the Tohoma I strain as a reference.

Although the genotypes determined using the complete genome agreed with that determined using the S ORF, there was a discrepancy in the subgenotype classification of SDAC031.

Using the complete genomes of Escherichia coli and Bacillus subtilis we show that stretches of codons pairing to minor tRNAs form putative sites to locally attenuate translation; thereby the tendency is to cluster in near proximity whereas long contiguous stretches of slow-translating triplets are avoided.

The primary screen was performed using the complete genome-wide siRNA library.

Using the complete genomes, we searched for common and exclusive CDS among endophytic bacteria in order to identify genes that could explain the endophytic capacity.

Using the complete genomes of 841 bacterial taxa including 25 Reb-harboring complete genomes we constructed protein families having at least 50% identity and 80% size conservation (see Material and Methods).

Using the complete genomes for 326 strains from 235 bacterial species and 27 strains from 27 archaeal species, we retrieved 342 RNase HI genes, 333 RNase HII genes, and 76 RNase HIII genes (see Additional file 1).