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The following chapter, by Guoyan Lv & Yanmei Gao, analyzes the process types and incident structure of a fiction by using the coding tool, BFSU Qualitative Coder 1.1 (p.91) to show that clausal constituents mark different phases of an incident.
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We used the standard coding tools to extract information from the data set, including Current Procedures and Terminology (CPT); International Classification of Diseases, Ninth Revision, Clinical Modification (ICD-9CM); Logical Observation Identifiers Names and Codes (LOINC); National Provider Identification NPI and National Drug Codes NDC(NDC).
Data were independently extracted from all included studies by pairs of reviewers using a coding tool specifically designed for this review.
If the classes.dex file obtained in this way is converted into smali code using the baksmali tool, we can observe the code in its original state as in Fig. 10.
Using the H.264/AVC Intra coding tool, we discuss the requirements of the algorithm and the impact on decoded image quality when these requirements are not met.
We further analysed the coding sequences using the Artemis tool [ 78] and manually re-annotated the genes of special interest.
Depth color-coding was performed using the 'Temporal-color code' tool.
To further investigate biological processes, we conducted enrichment tests on 422 human protein-coding genes using the online tool DAVID (Supplementary Table S4) (22).
The GO annotations are generated by manual curation of the literature and by sequence similarity (GO evidence code ISS) using the GOanna tool followed by manual inspection of the alignments that are produced.
The predicted protein coding sequences (obtained using the GetORF tool in EMBOSS [ 32]) were annotated to the non-redundant protein databases in GenBank and Swiss-Prot by BLASTp with a threshold of 1e-5.
To filter out contigs that were either misassembled, contained only UTR sequence or were assembled from premature mRNA, we then extracted likely coding regions (CDS) using the "TransDecoder" tool from the Trinity package (see Methods for details).
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