Sentence examples for using the blast tools from inspiring English sources

The tBLASTn algorithm [56] was used to search isoform-specific Muscleblind protein sequences in insect and C. elegans genome assembly DNA and Genbank EST databases using the BLAST tools posted in Flybase [57] and Wormbase [58], respectively.

Putative neurexin and neuroligin genes were identified in the Apis mellifera (honeybee) genome by homology-based searches using the BLAST tools from NCBI (http://www.ncbi.nlm.nih.gov) and Beebase (Honeybee Genome Database by Baylor College of Medicine at http://racerx00.tamu.edu/blast/blast.html).html

Sequence homology was analyzed using the BLAST tools at NCBI.

Entry clones sequences were annotated based on the reference sequences using the Blast tools of the HUSAR software package [ 41].

Firstly, the sequences of the identified PPIases were formatted by family as a database file using the BLAST tools package obtained from the ftp-site of NCBI [ 131, 146] and an "all against all" BLASTP method was used to identify homology between proteins.

All sequences were blasted using the BLAST tool of VectorBase (http://www.vectorbase.org/Tools/BLAST) against the An.

Primers were designed on the basis of known sequence information of Nipponbare genome (TIGRv3) by using the blast tool of Gramene (www.gramene.org).org

Using the BLAST tool, Collembase can be queried for genes valuable for phylogenetic inference.

The nucleotide sequence of defensin PaDef cDNA and the deduced amino acid sequence were analyzed using the Blast tool in the NCBI (http://blast.ncbi.nlm.nih.gov/).nih.gov/

Using the BLAST tool, their current annotation status was manually checked against the Uniprot database [ 30], and their domain architecture checked using the Pfam domain organization database.

Primers specificity was verified using the BLAST tool from the NCBI and a dissociation curve analysis was performed after the PCR reaction.