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Distinct unigenes were indentified using the BLAST search program.
Sequence homology was analyzed using the BLAST search and compared with the sequences reported in GenBank.
The resulted DNA sequences were phylogenetically analyzed using the BLAST search program.
To identify the isolated strain, the nucleotide sequence of ITS region was compared with those in the DDBJ by using the Blast search with nucleotide sequence database.
Homologous sequences of ASL3 were identified using the Blast search program of the National Center for Biotechnology Information (NCBI, http://www.ncbi.nlm.nih.gov/).nih.gov/
The nucleotide sequence of the rDNA was compared with those in the DDBJ by using the Blast search with nucleotide sequence database.
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Users can use the BLAST search to compare their own sequences with in-house sequences in the Pepper EST database.
We used the Blast search versus rodent Repbase repeat collection to check the similarity with known mouse repeats.
In addition to the sequence data base of MicroSeq, we compared our sequences using the BLAST analysis search (National Center of Biotechnology Information, Washington DC, www.ncbi.nlm.nih.gov/BLAST).nih.gov/BLAST
Differences between our results and the TADB are due to the different parameters used for the Blast search [29].
Low complexity filters were used in the blast search.
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