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New insertion/deletion markers for the NIP (japonica) and '93-11 '93-11ca) genome sequences (http://www.ncbindicanih.genomewere identified usequencesBLAST online tool.
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Sequence alignments and analyses were performed online using the BLAST program (http://www.ncbi.nlm.nih.gov/).nih.gov/
Sequence alignment and analyses were performed online using the BLAST program available at the National Center for Biotechnology Information web page http://www.ncbi.nlm.nih.gov.nih.gov
The putative gene cassettes harboured on the integrase sequences were determined through online similarity searches using the BLAST software in the National Center for Biotechnology Information website (http://www.ncbi.nlm.nih.gov/).nih.gov/
Online similarity searches were performed by using the BLAST tool in the GenBank database (http://www.ncbi.nlm.nih.gov/BLAST/).nih.gov/BLAST/
Genome coverage analysis using the Blast algorithm indicated that approximately 90% of genome is shared among the five SDSE strains (supplementary table S3, Supplementary Material online).
A specie determination using the blast analysis was not possible.
Distinct unigenes were indentified using the BLAST search program.
All sequences were blasted using the BLAST tool of VectorBase (http://www.vectorbase.org/Tools/BLAST) against the An.
Blast searches were performed using the blast program available at http://blast.ncbi.nlm.nih.gov.nih.gov
Primers were picked using the Primer-BLAST online tool (http://www.ncbi.nlm.nih.gov/tools/primer-blast/); sequences are available upon request.
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