Sentence examples for using the average expression from inspiring English sources

The heat map was generated with TMeV v4.8.1 using the average expression level of three replicates.

Where required, normalization was performed using the average expression of the five reference genes (ATP5E, GPX1, PGK1, UBB and VDAC2).

A "centroid" was generated for each subtype in the training set using the average expression for each gene across all prototype samples of a given subtype.

For each cancer, the tumor/normal ratio of each miRNA or gene was calculated using the average expression value in the respective samples.

A virtual "gold standard" poly(A)+ RNA array was created for BC91 using the average expression level of four hybridization replicates of unamplified poly(A)+ RNA.

Hierarchical clustering using the average expression value of these 11 microRNAs identified 4 distinctive patterns as illustrated in Figure 9. MiR398, miR1507a, miR1507b and miR156a were reduced after 3 h and increased after 12 h.

This normalization method uses the average expression of all miRNAs in each sample for normalization.

Unlike the regular SVM that uses the measured values, the alignment SVM uses the average expression of time points aligned to each of the HMM states.

In the subsequent analysis, for a gene with multiple probes we used the average expression profile to represent its expression so as to eliminate the weight effect due to multiple data points on a single location.

Here we used the average expression values of the eight IRGs as an IFN score to construct an ROC curve using an independent cohort of 26 patients and calculated the AUC, which was evaluated as a predictor for non-response.

When genes were represented more than once in the microarray platform, we used the averaged expression ratios.