Sentence examples for using the annotations of from inspiring English sources

To understand whether particular functions and processes are over-represented as gene ontology (GO) categories for these novel transcripts, we performed functional enrichment analysis of the PNTs by using the annotations of the corresponding mouse genes with which they overlap partially.

9, 10, 11 The aim of this study is to provide a comprehensive assessment of IOA in neonatal seizure detection by visual interpretation of long duration recordings of multichannel EEG using the annotations of three experienced reviewers.

We searched through the 44 D. melanogaster genomes generated by DPGP (www.dpgp.org; Langley et al. 2012) for alleles that varied in the position of the stop codon, using the annotations of the D. melanogaster reference genome (version 5.16).

Using the annotation of the A. thaliana chloroplast genome, the complete alignment was divided into 263 parts, corresponding to exons, introns and intergenic regions.

Open reading frames from 30 amino acids in length were predicted using Glimmer 3.0 [56] and verified manually using the annotation of EDL933 and Sakai.

Open reading frames from 30 amino acids in length were predicted using Glimmer 3.0[29] and verified manually using the annotation of N16961.

By using the annotation of PDBTM, we selected 4494 transmembrane residues from these structures.

We map the yeast Affymetrix probeset IDs to gene symbols using the annotation of the ygs98.db Bioconductor package.

All SNVs were intersected with information on gene coding regions by using the Annotation of Genetic Variants framework (ANNOVAR) [ 58].

To get enough sequences, we split each alignment in three: first exon, second exon, and the rest of gene, using the annotation of a reference species.

The functional characterization of the selected genes was using the annotation of the melon assembly than can be found on the MELONOMICS webpage [ 18].