Sentence examples for using the affymetrix platform from inspiring English sources

Using the Affymetrix platform we performed comprehensive gene expression analysis on 42 microdissected human kidney samples (glomeruli and tubules).

Subsequently, total RNA was isolated from DKO and control EC and subjected to gene expression profiling using the Affymetrix platform.

For this purpose, expression profiling was carried out for Line2, Line2-T500, Line3 and Line3-T200 using the Affymetrix platform.

GLAM predictions using the Affymetrix platform had an R2 of 0.94 with StaRT-PCR quantifications, Agilent one-color, R2 of 0.91 and Illumina, R2 of 0.9.

Thus analysis of the mitochondrial gene responses, as detected using the Affymetrix platform, strongly supports our conclusion that activation of many but not all mitochondrial genes occurred; a potentially adaptive, yet clearly ineffective, reponse at maintaining mitochondrial capacity.

Global gene expression changes were examined using the Affymetrix platform.

GWAS genotyping used the Illumina 550K (or higher version) platform with the exception of the T2D study, which was genotyped using the Affymetrix 6.0 platform.

NKI samples were profiled on the Agilent Human 25 K platform comprised of 24,496 non-control oligonucletoide probes while the other studies were carried out using the Affymetrix HG133A platform, compromised of 22,282 probe sets.

Methods: 25-mer nucleotide probes were designed to identify each base for all exons, 10 bases of intronic sequence bordering exons, 280 500 bases upstream from the first exon for each gene, and 350 bases of the second intron of the JAG1 gene and tiled using the Affymetrix resequencing platform.

SNPs genotyping for all samples was performed using the Affymetrix GeneChip platform.

All GEPs were performed using the Affymetrix microarray platform and standard procedures.