Sentence examples for using the admixture model from inspiring English sources

Individuals were clustered with Structure 2.2 software [40] using the admixture model and 10,000 burn-ins and iterations.

Five independent runs of structure were carried out for the total data set for K = 1 to K = 10 using the admixture model and correlated allele frequencies [36].

Briefly, 100,000 iterations with a burn-in period of 30,000 iterations were used to determine population assignments of STs using the "admixture" model and assuming two populations as previously established [7].

For each set of antigen haplotypes, structure was run 20 times for K = 1 10 for 10,000 Monte Carlo Markov Chain (MCMC) iterations after a burn-in period of 10,000 [66] using the admixture model and correlated allele frequencies.

STRUCTURE was run multiple times, using the admixture model, under the hypothesis that the number of populations (K) contained within the whale shark data set was between 1 and 5. Values for ln Pr(X/K) varied little for the different estimates of K, indicating that individuals could not be partitioned into discrete genetic clusters.

STRUCTURE version 2.1 [37] was used to estimate the most likely number of populations (K) represented by the entire sample set, using the admixture model with 50,000 steps conducted as "burn-in followed by 100,000 Markov chains, with three iterations per K.

We used the admixture model, which assumes that individuals have mixed ancestry, and did not include sampling origin information in our priors, making our model more stringent.

We used the admixture model and assumed that the allele frequencies were correlated among the populations.

We used the admixture model with independent allele frequencies keeping lambda = 0.7 after preliminary tests.

Following [ 9], we used the "admixture model" assuming "no correlation among allele frequencies".

We used the admixture model with correlated allelic frequencies without prior information.