Sentence examples for using the adjacent probes from inspiring English sources

When these gaps span over one or two probes, our algorithm can overcome this by using the adjacent probes for nucleosome positioning.

For a fixed log ratio threshold, if a proportion and number of adjacent probes are chosen such that both methods have the same TPR, the FPR level is frequently higher when using the adjacent probes criteria (Table 1 and Additional file 2).

Using the adjacency information of the floorplan, adjacent zones of adjacent walls are identified and connected.

In this case, relying on the "adjacent probe" method for deletion detection increases the FPR.

A key feature of the CPM is that we average over adjacent probes by using the hierarchical model and do not require that the means and variances of the four classes are fixed, but rather are drawn from state specific models.

For assessing technical variance and to allow a comprehensive comparison of BMIQ to PBC/SWAN across many datasets, we use in addition to replicates, a novel evaluation framework based on using adjacent type1 type2 probe pairs within probe clusters, a framework which we show leads to consistent and robust conclusions across 10 independent datasets.

The three adjacent probes constituted approximately a 200-bp homology search.

After scaled log2 IP/Input) data was generated, the modified algorithm was applied to carry out the one-sided Kolmogorov-Smirnov test on several adjacent probes using sliding windows to predict enriched regions across the microarray.

Given that adjacent probes within a single gene may differ in signal with a standard deviation >1 (on a log2 scale) [35] we have the option to create a very conservative dataset by selectively removing probes using the results of the gcRMA algorithm [11] run on the original raw dataset, in comparison to the dataset returned by the normalization procedure described above.

Targeted disruption of Glra2 in the progeny was confirmed by PCR and Southern blotting using probes adjacent to both arms of the Glra2 targeting construct.

However, geometrical restrictions of the SEM chamber and adjacent probes require the incident and reflected laser beams to be on the same plane as the probe cantilever.