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Expression signal values and p-values were obtained for each PS using the Robust Microarray Analysis (RMA) algorithm in ArrayAssit® software (Stratagene, La Jolla, CA, USA), on the "full" PS set (1,381,324 PS).
Raw microarray intensity values are pre-processed using the Robust Microarray Average (RMA) method [ 22].
Raw probe intensities were normalized using the Robust Microarray Average (RMA) approach [ 81].
Data were normalised and probe intensity measures were generated using the Robust Microarray Analysis algorithm (Irizarry et al, 2003).
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Data files of all microarrays were normalized using the Robust Multi-Chip Average (GCRMA) method [ 57].
Microarray data was processed using the robust multi-array averaging method (RMA) [ 41].
Microarray data was normalized using the robust multichip average method (RMA) [ 21, 22].
Affymetrix microarray data were normalized using the robust multi-array average algorithm implemented in the affy package [ 17].
The microarray data were preprocessed using the Robust Multichip Average (RMA) package [ 123] as implemented in R [ 124].
Data normalization of microarray experiments were performed using the robust multi-array average (RMA) algorithm included in the Partek Genomics Suite software (Partek, MO, USA).
The microarray data were analyzed using the robust multi-array average (RMA) software (RMA version 0.2) of background adjusted, normalized, and log transformed perfect match values [ 63].
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