Sentence examples for using the NimbleGen microarray from inspiring English sources

Microarray was carried out using the NimbleGen microarray service.

Array data (See Additional file 18) were normalized using the NimbleGen microarray data processing pipeline (NMPP) [ 65].

In a genome-wide expression analysis using the NimbleGen microarray platform, of Auxin/Indole-3-Acetic Acid (Aux/IAA) and Auxin Response Factor (ARF) in Populus (Populus trichocarpa clone Nisqually-1), the genes in a subgroup of Aux/IAA showed differential expression among different tissue types [ 18].

To test whether the association of MYCN at sites of hypermethylation is correlated with reduced expression of genes, we have analyzed the Kelly and SK-N-AS cell lines using the NimbleGen expression microarray platform.

We verified these predictions by performing a ChAP-chip experiment using the Nimblegen promoter microarray.

Oligonucleotide array comparative genomic hybridization was performed using the Nimblegen 135 K microarray (Roche Nimblegen) or Agilent 44 K/60 K/75 K/105 K microarrays (Agilent Technologies) in an accredited clinical laboratory in accordance with manufacturer's instructions.

The arrays were dried for one minute using a High-Speed Microarray Centrifuge (Arrayit Corp., Sunnyvale, Ca).. Image acquisition was attained using the NimbleGen MS 200 Microarray Scanner (Roche NimbleGen, Inc). at 2 μm resolution.

Images were acquired by using The NimbleGen MS 200 Microarray Scanner (NimbleGen Systems, Inc., Madison, WI) at a 5 μm resolution.

Six biological replicates, comprising two clusters each, were separated into skins and pulp in preparation for RNA extraction and transcriptomic analysis using the NimbleGen Grape Whole-Genome Microarray.

Methylated DNA immunoprecipitation followed by microarray analysis using the Nimblegen '3 × 720 K CpG Island Plus RefSeq Promoter' platform was applied in order to carry out genome-wide DNA methylation profiling covering 20 404 promoter regions.

Following hybridization, the microarray was washed using the NimbleGen Wash Buffer Kit.