Sentence examples for using the Mascot database from inspiring English sources

The generated peptide fragmentation spectra were searched using the MASCOT database search engine (http://www.matrixscience.com) in the SwissProt database (taxonomy was set to human).

The fragmentation spectra were converted to mgf files using the Automation Engine software (version 3.2, Bruker) and were searched using the MASCOT database search engine (version 2.2.0, Matrix Science, http://www.matrixscience.com) in the appropriate databases.

Data obtained by mass spectrometry of rhinocerase were searched using the Mascot database [21] and the closest match was found to be the serine protease Elegaxobin I from Trimeresurus elegans.

Proteins were identified using the Mascot database search engine.

Figure 2 illustrates the mass spectrum of fraction B. The analysis of ion sequencing was made using the Mascot database.

In addition, the amino acid sequence of each cellulase was determined by mass spectrometry [ 63] and cellulase identities were checked using the Mascot database [ 64] (data not shown).

Protein identification was done using the Mascot database-searching software (Matrix Science, London, UK; version 2.2.04) using our database of the pyrosequencing-based EST mantle library from P. margaritifera.

The MGF files were processed using the Mascot™ database search engine v2.2.03 (Matrix Science Ltd., UK).

The data obtained from MALDI-TOF/TOF MS analysis was used to identify proteins using the MASCOT protein database search engine maintained at http://www.matrixscience.com.com

The MS and MS/MS spectra were combined and used for a database search in an in-house protein database using the Mascot software.

Peptide identification was performed by searching the individual peak lists against a concatenated target-decoy database containing the E. coli sequences in the Uniprot database (release 2012_06) supplemented with a common contaminants database using the Mascot search engine version 2.3 (Matrix Science, London, United Kingdom) via the Proteome Discoverer interface.