Sentence examples for using the GOrilla tool from inspiring English sources

To formalise whether hub genes tended to belong to a particular gene ontology, we sorted the nodes by connectivity (in descending order) and the GO terms of those enriched at the top of the list was determined using the GOrilla tool [33].

GO enrichment analysis was performed using the GOrilla tool.

A gene ontology (GO) [ 41] analysis was performed using the GOrilla tool [ 42] in order to determine overrepresented GO categories in the gene set of tissue elevated genes.

To understand the biological functions of the genes in the consensus modules, we performed Gene Ontology enrichment analysis using the GOrilla tool [ 45].

We identified overrepresented gene ontology (GO) terms (Gene Ontology Consortium 2000), using the GOrilla tool (Eden et al. 2009), which is designed to find enrichments at the top of a ranked gene list.

We then tested for enrichment of GO terms of segments of that list: the first 1000 proteins, proteins 1001 2000 etc., using the GOrilla tool (Eden et al., 2009).

The F 0 were extracted using the STRAIGHT tool [40].

The survey was developed using the Lime Survey tool (LimeSurvey 2014).

The neural-network predictor is trained using the REST tool.

Accident data was analysed using the ONHA tool developed in cooperation with Mikko Virkkunen of Simsoft Ltd.

In this section, we evaluate the performance of the proposed algorithm by using the MATLAB tool.