Sentence examples for using the 55k snp from inspiring English sources

Genotypes of all 278 lines were obtained using the 55k SNP Illumina platform.

By using the 100K SNP scan of the Framingham Heart Study, we identified an age-varying association between a SNP in ROBO1 and obesity and hypothesized an age-gene interaction.

To quantify the two alleles, measurement of the area under the peak corresponding to each allele was performed using the PSQ™96MA SNP software.

Phylogenetic analysis was implemented in MEGA5 using the 13,390 SNP markers (Tamura and Nei 1993).

A set of 192 BC1 individuals were genotyped using the 384 SNP custom array.

This was confirmed by the haplotype reconstruction using the 1 976 SNP.

We resolved this problem by constructing a maximum-parsimony tree using the 5 SNP, LSP, and MIRU24 repeat numbers.

The present result shows that using the 60 SNP loci, the chance of sampling identical genotypes from a random mating population would be 1 out 100 000.

We estimated genome-wide ancestry for each Kosraen (N=2988) individually using the 106 541 SNP data set (see Materials and Methods section).

By scanning the rapeseed association panel using the 60K SNP array, the clustering results showed that ∼10 000 SNPs had zero call frequency of AA or BB, which could, in part, be caused by inter-homoeologue polymorphisms.

All samples were genotyped by a private company (DNA Landmarks, Inc .. SNP genotyping was performed using the 60K SNP Illumina iSelect™ chicken microarray (Groenen et al. 2011; http://www.illumina.com/).