Sentence examples for using packages from the from inspiring English sources

Array images were processed using packages from the Bioconductor project [33].

Quality control of microarray data, normalization, differential expression analysis and Gene Set Enrichment Analysis [30] were performed using packages from the R/Bioconductor project [76], [77] through the Management and Analysis Database for MicroArray eXperiments (MADMAX) analysis pipeline [78].

The data set containing expression values for 22,283 probe sets and 12 samples was analyzed inside the R environment [46] mainly using packages from the BioConductor project [47].

All analyses were performed in R, 26 using packages from the Bioconductor project.

Scans of the Affymetrix arrays were processed using packages from the Bioconductor project [ 67].

Analysis was carried out using the statistical programming language R (version 2.13.0) using packages from the Bioconductor project [ 16].

Subsequent analyses of the gene expression data was carried out in the freely available statistical computing language R using packages available from the Bioconductor project [ 65].

Subsequent analysis of the gene expression data was performed in the statistical computing language R http://www.r-project.org using packages available from the Bioconductor project http://www.bioconductor.org.

using software from the VoxBo statistical package.

Underlying cause of death was coded using computer packages from the National Center for Health Statistics (1997a, 1997b, 1997c).

Further data processing was performed in the R computing environment using specific packages from the BioConductor software project [ 18].