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(XLSX 82 KB) 12284_2013_62_MOESM8_ESM.xlsx Additional file 8: Motifs predicted using microarray data of A. thaliana subjected to NaCl stress.
The expression patterns of genes across developmental stages of S. japonicum will be reconstructed using microarray data of published studies or ongoing projects.
Statistically significant proteins were furthermore obtained by comparison of the developed network with networks constructed using microarray data of zebrafish target proteins randomized across time-points.
We also applied our method to construct and analyze a sample co-expression network using microarray data of normal and cancerous T and B cells including diffuse large B-cell lymphoma (DLBCL) [ 30].
Only a few studies have been carried out using microarray data of Arabidopsis, Glycine max (soybean) and rice to predict the most suitable reference genes under specific experimental conditions followed by their validation using RT qPCR and/or statistical algorithms.
In this report, we describe the development of an octamer-based prediction method using microarray data of phytohormone responses and all the predicted data by analysis of 622 hormone-responsive Arabidopsis promoters.
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I used microarray data of breast cancer samples from four published studies.
To evaluate these observations, we used microarray data of 251 primary neuroblastomas, and compared the expression levels of GATA-2, -3, -4 and FOG-2 in different clinico-genetic subgroups.
Hereto, we used microarray data of the transgenic lines that were generated specifically for this study and compared them with data from publicly available databases on 16 Arabidopsis accessions and four groups of lines derived from an Arabidopsis RIL population (Ler/Cvi).
Further, using microarray data for smokers suspected of having cancer, it is possible to compute mapping errors for further diagnostic evaluation of smokers with or without cancer.
This was performed using microarray data sets of CAFs and NFs reported by Navab et al. [ 21].
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