Sentence examples for using default settings from inspiring English sources

Standardization was performed using default settings except for the option 'splitfragments' that was set to TRUE.

Visualization and analysis of this set was performed in VisANT 3.0 using default settings.

The simulated data sets were analyzed by breseq (version 0.25) using default settings.

Syntenic and tandem duplications were analyzed using Synmap application in CoGe86 using default settings.

Both stages were run using default settings and also incorporated the Pfam vr.

Pocket identification was carried out with DogSiteScorer server33 using default settings.

Protein clusters were aligned by PRANK v.100802 (refs. 46,47) using default settings.

GO analysis in Supplementary Data 5 was done using DAVID 6.8 (https://david.ncifcrf.gov) using default settings.

We used Bowtie251 v.2.2.9 for mapping using default settings and local alignment.

Reads were mapped to the meta-transcriptome with Bowtie2 v2.0.691 using default settings.

Venn diagrams were generated using http://bioinformatics.psb.ugent.be/webtools/Venn/ using default settings.