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Non-chordate sequences were analyzed using BLAST to identify blood meal species.
Those templates were searched against EST databases/transcriptome databases using BLAST to identify corresponding transcripts.
New cyclin genes and proteins have been characterized using various strategies for example using BLAST to identify cyclins in Caenorhabditis elegans, Drosophila melanogastor and Homo sapiens [16], and Hidden Markov Models (HMM) based methods in Arabidopsis genome [17].
These repeats present a practical problem when using BLAST to identify homologous unigenes within and between Heliconius species.
This database is compiled using a set of representative NifH protein sequences using BLAST to identify NifH in public repositories.
The proteins were first searched against Genbank [ 36] and SwissProt [ 37] using BLAST to identify known proteins with similar sequences.
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We used BLAST to identify sequences with significant sequence similarity to each parent gene (see Methods for details).
Previous studies have used BLAST to identify CEP genes in a haphazard way across existing sequence databases [ 6, 9].
Previous studies of CEP genes in angiosperms used BLAST to identify CEPs in a haphazard way using both genomic and expressed sequence tag resources [ 6, 9].
In the Using Bioinformatics: Genetic Research curriculum, students use BLAST to identify an unknown DNA sequence, perform multiple sequence alignments, and build phylogenetic trees (Table 2).
To compare repeats between regions of the genome, I instead used BLAST to identify Rsp repeats in sequenced BACs mapping to known genomic locations.
More suggestions(15)
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using radiography to identify
using blast to search
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using blast to query
using blast to anchor
using blast to transfer
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using blast to find
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