Sentence examples for using an evolutionary model from inspiring English sources

Using an evolutionary model in combination with a tree that correctly represents the phylogenetic distances between the used sequences is indeed advantageous when adding closely related sequences.

On the other hand, the detection of positive selection in coding regions using an evolutionary model based on dN/dS might suffer from several sources of bias [15], [37].

A third possibility offered by Turner and Chubin [5] is the so-called Ecclesiastes hypothesis: these authors argue that scientific advancements can be considered as the result of chance processes or fortune using an evolutionary model of science.

Furthermore, at first glance, the glycolytic profile of cancer is difficult to understand, using an evolutionary model of carcinogenesis.

In the first (COGParsimony), the empirical gene family dynamics were estimated by maximum parsimony, whereas in the second (COGModel), it was estimated using an evolutionary model with parameters fitted to the data.

This drop in RR was most obvious for MEME as it does not use an evolutionary model.

The best results were obtained for a proximity of 0.50 (Figure 3(C)) and under these optimal conditions, algorithms that use an evolutionary model clearly outperform the non-phylogenetic motif detection algorithm in finding high quality motifs (both Sens and PPV).

Our method uses an evolutionary model to infer all necessary parameters from the data set itself.

The Island model uses an evolutionary model to assign sequence types to a particular source "island" or population (12).

Here, we use an evolutionary model of regulatory gene interactions during development to identify the conditions under which the hourglass effect can emerge in a general setting.

This program is different from most other alignment programs in that it uses an evolutionary model to place insertions and deletions, with the result of minimizing the overalignment of nonhomologous regions.