Sentence examples for using an alignment approach from inspiring English sources

Block groups are then compared using an alignment approach.

We used an alignment approach to compare the motif descriptions from all three motif discovery pipelines on the large core set of expression conditions.

Sequences were analyzed using an alignment-based approach.

Here, we characterize protein sequences using an alignment-free approach based on techniques of time series analysis commonly-used in statistical physics and elsewhere (Bray, 2013; Redner, 2007).

As shown in Figure 7, synteny blocks identified here are significantly larger that those identified using an alignment-based approach [ 19].

Due to large amounts of sequencing data available for these repeats their composition was investigated using an alignment-free approach employing oligomer frequency statistics (Macas et al. 2010).

Complete data are available in Additional file 1 and on the CorBank site [ 14]). a RefSeq (Release 30) and Genome Reviews (Release 94.0) of July 2008 We further studied these imperfectly matching sequences by measuring their similarity using an alignment-free approach (for a review and references inside, see [ 16]).

Using a network alignment approach to project these pathways across species allows us to not only consider their first-order dynamics, through co-expression of homologous protein pairs, but also the context in which they are expressed.

Prior analysis using a sequence alignment approach coincides with this interpretation (Brown et al. 2002).

We propose to circumvent this limitation using a subnetwork alignment approach.

For each sequenced genotype, the proportions of sequence reads of probable bacterial or plastid genome origin were estimated using a reference alignment approach.