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In general, an analyst is able to solve a deterministic problem using a specific solver, for instance a commercial FE-solver or an in-house solver.
The name of this file tells URDME what solver it builds; when urdme is invoked with the option to run a simulation using a specific solver, it will look for a Makefile with the correct naming pattern.
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Figure 3 Simulation of the band structure using a 1D Poisson solver (Snider Poisson-Solver:http://www.nd.edu/∼gsnider/).edu/∼gsnider/
The first is solved directly using a commercial solver.
All used models were input-oriented and solved using a robust solver XA from Sunset Software Technology.
Figure 8 shows the distribution of X at T = 5 calculated using a CME solver.
(d) When all gene vectors have been assigned, recalculate the profile of each cluster using a TSP solver.
The simulations are performed using high and low order finite difference solvers as well as using a pseudo-spectral solver.
Numerical simulations are carried out using a finite-volume solver.
As before, simulations were carried out using a Matlab ODE solver for the set of equations (1).
Electrostatic potentials were calculated using a Poisson-Boltzmann solver included in the GRASP program [ 31].
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