On the back-end side, the streaming infrastructure is composed of a communication handler and four different kinds of workers addressing dark frames, diffraction frames, reduced and downsampled images and the ptychographic reconstruction using a software package for scalable heterogeneous adaptive real-time ptychography (SHARP [18]).
In order to select events for offline analysis, ¯¯¯PANDA will use a software-based triggerless online reconstruction, performed with a data rate of 200 GB/s.
Information on coronary anatomy is stored using a cardiac reconstruction software program (Heartview, Siemens Medical Systems).
The historical effects of natural selection on the cytb protein were estimated with the software TreeSAAP using a phylogenetic reconstruction for 107 mammal taxa from all major mammalian lineages using 13 complete protein-coding mitochondrial gene sequences.
To measure the surface characteristics, Digital Elevation Model (DEM) of the tip was created by 3D reconstruction technique using a commercial software package MeX (Alicona, Graz, Austria) [18].
The XVI software uses a cone-beam reconstruction process based on the Feldkamp-Davis-Kress (FDK) algorithm.
The PET image reconstruction was performed with the iterative Philips reconstruction software, using a 3D line-of-response time-of-flight blob-based algorithm using the standard parameter settings (3 iterations, 33 subsets, relaxation parameter: 1.0, transverse image matrix size: 144 × 144 voxels, voxel size: 4 × 4 × 4 mm3).
All genotype data for each sample were taken to infer the haplotypes by using the PHASE 2.0 program[35], a software for reconstruction of haplotypes from population genotype data by Bayesian statistical method.
This was performed using Siemens reconstruction software including implementations for TOF and PSF modelling (HD, UHD).
Histological images of the developing prostate buds and associated structures were traced, contoured, and realigned as surface-rendered 3-D models using Winsurf reconstruction software (University of Hawaii at Manoa, Honolulu, HI, USA).
