Although the analysis of the Golub et al. data provides some level of confidence that we can faithfully recover pair-wise interactions between genes using a seeded BN approach, we developed this approach in hopes of deducing the structure of biological networks from gene expression data.
Gold nanoparticles were synthesized using a seeded growth approach.
Gold nanoparticles were prepared via liquid arc discharge technique using a seed-mediated approach in solution and characterized by dynamic light scattering, UV vis spectroscopy, X-ray diffraction, optical imaging, and atomic force microscopy.
To investigate whether analogous scMRI networks are present in lower mammal species amenable to genetic and experimental manipulation such as the laboratory mouse, we employed high resolution morphoanatomical MRI in a large cohort of genetically-homogeneous wild-type mice (C57Bl6/J) and mapped scMRI networks using a seed-based approach.
These NRs were synthesized using a seeded growth approach.
After pre-processing, corticocortical functional connectivity was assessed using a seed-based approach, according to methods described elsewhere (Fox et al., 2005; Biswal et al., 2010).
Data were analyzed using a seed-driven approach with the Conn toolbox [ 48– 51] that was designed to work with both resting state scans and block designs.
The fcMRI data were analyzed using a seed-based approach by choosing bilateral posterior cingulate [±10 −56 −12] and dorsolateral prefrontal [±45 +16 +45] cortices based on MNI coordinates (size = 0.73 cm) (Sridharan et al. 2008; Xu et al. 2011).
To study functional changes in one-handers, voxel-wise alterations in resting-state functional connectivity to the missing hand's territory (or the non-dominant hand region in controls) were examined using a seed-based approach (see 'Materials and methods').
Using a seed-point based approach, we employed phase-amplitude coupling (PAC) and biPhase Locking Values (bPLV), two measures of cross-frequency coupling (CFC) to explore both outgoing and incoming connections between the seed and all non-seed, site electrodes.
